Interaction potential models for bulk Zns,Zns nanoparticle,and Zns nanoparticle‐PMMA from first‐principles

An ab initio derived transferable polarizable force‐field has been developed for Zinc sulphide (ZnS) nanoparticle (NP) and ZnS NP‐PMMA nanocomposite. The structure and elastic constants of bulk ZnS using the new force‐field are within a few percent of experimental observables. The new force‐field show remarkable ability to reproduce structures and nucleation energies of nanoclusters (Zn₁S₁‐Zn₁₂S₁₂) as validated with that of the density functional theory calculations. A qualitative agreement of the radial distribution functions of Zn? O, in a ZnS nanocluster‐PMMA system, obtained using molecular mechanics molecular dynamics (MD) and ab initio MD (AIMD) simulations indicates that the ZnS–PMMA interaction through Zn? O bonding is explained satisfactorily by our force‐field. © 2015 Wiley Periodicals, Inc.     

QuickFF: A program for a quick and easy derivation of force fields for metal‐organic frameworks from ab initio input

QuickFF is a software package to derive accurate force fields for isolated and complex molecular systems in a quick and easy manner. Apart from its general applicability, the program has been designed to generate force fields for metal‐organic frameworks in an automated fashion. The force field parameters for the covalent interaction are derived from ab initio data. The mathematical expression of the covalent energy is kept simple to ensure robustness and to avoid fitting deficiencies as much as possible. The user needs to produce an equilibrium structure and a Hessian matrix for one or more building units. Afterward, a force field is generated for the system using a three‐step method implemented in QuickFF. The first two steps of the methodology are designed to minimize correlations among the force field parameters. In the last step, the parameters are refined by imposing the force field parameters to reproduce the ab initio Hessian matrix in Cartesian coordinate space as accurate as possible. The method is applied on a set of 1000 organic molecules to show the easiness of the software protocol. To illustrate its application to metal‐organic frameworks (MOFs), QuickFF is used to determine force fields for MIL‐53(Al) and MOF‐5. For both materials, accurate force fields were already generated in literature but they requested a lot of manual interventions. QuickFF is a tool that can easily be used by anyone with a basic knowledge of performing ab initio calculations. As a result, accurate force fields are generated with minimal effort. © 2015 Wiley Periodicals, Inc.     

The PyPES library of high quality semi‐global potential energy surfaces

In this article, we present a Python‐based library of high quality semi‐global potential energy surfaces for 50 polyatomic molecules with up to six atoms. We anticipate that these surfaces will find widespread application in the testing of new potential energy surface construction algorithms and nuclear ro‐vibrational structure theories. To this end, we provide the ability to generate the energy derivatives required for Taylor series expansions to sixth order about any point on the potential energy surface in a range of common coordinate systems, including curvilinear internal, Cartesian, and normal mode coordinates. The PyPES package, along with FORTRAN, C, MATLAB and Mathematica wrappers, is available at http://sourceforge.net/projects/pypes-lib . © 2015 Wiley Periodicals, Inc.     

Structure and Thermodynamics of Mg:Phosphate Interactions in Water: A Simulation Study

The association of Mg²⁺ and H₂PO₄^? in water can give insights into Mg:phosphate interactions in general, which are very widespread, but for which experimental data is surprisingly sparse. It is studied through molecular dynamics simulations (>100 ns) by using the polarizable AMOEBA force field, and the association free energy is computed for the first time. Explicit consideration of outer‐sphere and two types of inner‐sphere association provides considerable insight into the dynamics and thermodynamics of ion pairing. After careful assessment of the computational approximations, the agreement with experimental values indicates that the methodology can be extended to other inorganic and biological Mg:phosphate interactions in solution.     

Measurement of Large Dipolar Couplings of a Liquid Crystal with Terminal Phenyl Rings and Estimation of the Order Parameters

NMR spectroscopy is a powerful means of studying liquid‐crystalline systems at atomic resolutions. Of the many parameters that can provide information on the dynamics and order of the systems, ¹H–¹³C dipolar couplings are an important means of obtaining such information. Depending on the details of the molecular structure and the magnitude of the order parameters, the dipolar couplings can vary over a wide range of values. Thus the method employed to estimate the dipolar couplings should be capable of estimating both large and small dipolar couplings at the same time. For this purpose, we consider here a two‐dimensional NMR experiment that works similar to the insensitive nuclei enhanced by polarization transfer (INEPT) experiment in solution. With the incorporation of a modification proposed earlier for experiments with low radio frequency power, the scheme is observed to enable a wide range of dipolar couplings to be estimated at the same time. We utilized this approach to obtain dipolar couplings in a liquid crystal with phenyl rings attached to either end of the molecule, and estimated its local order parameters.     

Optical Activity in the Near‐IR Region: The λ=980 nm Multiplet of Chiral Yb3+ Complexes

We used a very simplified electrostatic model based on charge and polarizability of atoms and groups on an organic ligand around a lanthanide ion to predict the near‐infrared electronic circular dichroism (NIR ECD) spectra of Yb³⁺ (a monoelectronic ion). We tuned our method by using two widely different complexes. The first was the heterobimetallic species CsYb(hfbc)₄ [hfbc=(?)‐3‐heptafluorobutyrylcamphorate], in which the ligand is a diketonate and, as such, is endowed with a chromophore with strong UV absorption (π–π^*). Its oxygen atoms define a square antiprism, which provides a symmetric coordination polyhedron. The second system was Yb DOTMA [DOTMA=(1R,4R,7R,10R)‐α,α′,α′′,α′′′‐tetramethyl‐1,4,7,10‐tetraazacyclododecane‐1,4,7,10‐tetraacetic acid], a chiral Yb analogue of Gd DOTA (DOTA=1,4,7,10‐tetraazacyclododecane‐1,4,7,10‐tetraacetic acid), in which the ligand lacks relevant electronic transitions and provides a dissymmetric cage. The relative weights of dynamic (ligand polarization) and static contributions to Yb NIR ECD were evaluated, and the spectra appear to have been well predicted by theory through the introduction of a heuristic weight factor. To validate the approach and to confirm the value of the weight factor, we applied it to two other compounds, namely, Na₃Yb(BINOLate)₃ and Yb(BINOLAM)₃ [BINOLate=2,2′‐dihydroxy‐1,1′‐binaphthyl; BINOLAM=3,3′‐bis(diethylaminomethyl)‐1‐1′‐bi‐2‐naphthol].     

非均匀流体介质内部散射声场重建的逐层计算方法*

入射声波激励下非均匀流体介质内部散射声场的重建方法对超声层析成像具有重要意义。以往采用矩量法求解,但该方法全域离散形成的复数满秩矩阵规模随着分辨率与计算精度的提高而急剧增大,对算力具有很高的要求,一定程度上限制了其在实际中的应用。为克服上述缺陷,本文以逐层离散、逐层计算为核心思想,以声散射基本公式与近场声全息理论为基础,推导出逐层计算非均匀流体介质内部散射声场的理论公式并给出对应的几何离散模型。为验证该方法的可行性,以矩量法为参照,对同样的介质模型进行介质内部声场重构仿真。结果表明,逐层算法不仅可以有效地重建非均匀流体介质内部散射声场,且大幅度减小了求解规模。     

Gauging universe expansion via scalar fields

In this study, we investigate the expansion of the FRLW universe in the open, closed, and flat geometries. The universe is dominated by a scalar field (spatially homogeneous) as a source of dark energy. We consider the three different classes of scalar fields – quintessence, tachyonic, and phantom field – for our analysis. A mathematical analysis is carried out by considering these three scalar fields with exponential and power-law potentials. Both potentials give exponential expansion in the open, closed, and flat FRLW universes. It is found that quintessence, tachyonic, and phantom scalar fields are indistinguishable under the slow roll approximation.     

超高效液相色谱-四极杆/静电场轨道阱高分辨质谱法非靶向筛查苹果中苯脲类农药

建立了超高效液相色谱－四极杆/静电场轨道阱高分辨质谱（UPLC-Q/Orbitrap HRMS）非靶向筛查苹果中苯脲类农药的方法。样品采用QuEChERS法提取净化,Acquity BEH C18色谱柱（100 mm × 2.1 mm,1.7 μm）分离,以甲醇和含0.1%甲酸的水溶液为流动相进行梯度洗脱,在电喷雾正离子模式下采用四极杆/静电场轨道阱高分辨质谱进行检测。将13种苯脲类除草剂和9种苯甲酰脲类杀虫剂按化学结构分为4类。首先通过对4类22种典型苯脲类农药标准品的准分子离子和二级质谱碎片进行分析,总结苯脲类农药的质谱裂解规律如下：绿麦隆等9种苯脲类除草剂的主要特征离子碎片为m/z 72.044 59,可通过特征丢失中性分子二甲胺（m/z 45.058 03）产生特征离子碎片;绿谷隆等4种苯脲类除草剂可通过特征丢失中性分子甲醇［CH3OH］或卤化氢［HR1］（R=Cl,Br,F）产生离子碎片;除虫脲等7种含氟苯甲酰脲杀虫剂的主要特征离子碎片为 m/z 158.040 47、141.015 00,也可发生特征中性丢失2,6-氟苯甲酰胺结构［C8H3F2O2NH2］（m/z 183.013 21）;杀铃脲等2种含氯苯甲酰脲类杀虫剂的主要特征离子碎片为m/z 156.020 25、138.993 76、113.015 28。利用该方法对北京12份市售苹果进行非靶向筛查,在1份样品中筛查出绿麦隆。该方法可为快速筛查农产品中相似结构特征的苯脲类化合物提供参考。